News & Events
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- June 17, 2019 - June 21, 2019:
Dr. Jonoska and Margherita are attending the Collaborative Workshop for Women in Mathematical Biology.
- June 10, 2019 - June 21, 2019:
Lina is attending the MSRI's Random and Arithmetic Structures in Topology summer school in Berkeley, California.
- June 03, 2019 - June 07, 2019:
Hwee and Dr. Jonoska presented at the UCNC conference in Tokyo, Japan.
- May 18, 2019 - May 19, 2019:
Margherita and Hwee presented at the 31st Cumberland Conference at UCF.
- March 22, 2019:
Lina, Jasper, James and Kyle attended the 11th Annual Graduate Student Research Symposium at University of South Florida (photo).
- March 04, 2019 - March 08, 2019:
Hayden attended the .50th Southeastern International Conference on Combinatorics,
Graph Theory & Computing at FAU and presented his work on topological properties of ribbon graphs created from insertions in DOWs.
- February 15, 2019 - February 16, 2019:
Lina and James presented their work at the MAA conference in Lakeland (photo1, photo2).
- February 13, 2019 - February 15, 2019:
Robyn Lutz and Jack Lutz visited the group from Iowa State University.
- February 11, 2019 - February 15, 2019:
Dr. Rafik Neme is visiting the group from Columbia University and presented his work on the evolutionary significance of gene scrambling.
- February 09, 2019:
Margherita and Lina attended the Florida Women in Mathematics Day hosted by FAU.
Next group meeting will be held on June 24 at 2pm.
The remaining summer meetings will be held at 11am on: July 8th, July 23rd, July 31st, August 14th and August 21st.
Show Older Meetings
- June 12, 2019:
Margherita showed the group some pictures to describe the double-strand break repair process in DNA/RNA and the output sh obtained from Rlooper. James presented some updates about his work on DNA origami. Jasper got in touch with Rafik and provided some updates on his new project with DOWs. Hayden mentioned results he has obtained about insertion graphs. The group was visited by a group of high school students, and each member gave a short presentation on the project they are working on.
- May 29, 2019:
The group provided feedback for Hwee's presentation slides. James discussed some properties of scaffold-staple diagrams that can be used to determine rewriting rules. Jasper is looking at the numerical outputs of his program to make sure they make sense. He is arranging a meeting with Rafik to work on the manuscript. Some of the outputs of Lina's program were reviewed. She will compare the results to some worked out by hand and interpret the results.
- May 22, 2019:
Hwee is working on a manuscript about separations in DOWs and counting. He updated some of the proofs. Margherita talked to the group at Georgia Tech and started working on a model, based on their input, to explain how RNA and DNA bind. Kyle generated a table with the probability that a given protein is in a given cluster, so that the gene expression data can be analyzed. Jasper is working on a manuscript. Lina will compare the program outputs for all DOWs of a given length.
- May 17, 2019:
Hwee practiced his presentation on the DNA scaffolding and staple model. Jasper is working working on a manuscript, Lina is going to run her Betti number computing program through DOWs obtained from biological data.
- May 07, 2019:
Kyle discussed the results he obtained by running the software Rafik provided. Jasper is finalizing his manuscript about phpMIDAS for submission. Margherita provided updates about the software used to predict RNA structures. Hayden submitted his paper on the genus range of assembly graphs and is now working on the software to compute it.